Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908804.1_cds_XP_016458993.1_52565
CDS Infomation

[gene=LOC107782608] [db_xref=GeneID:107782608] [protein=probable membrane metalloprotease ARASP2, chloroplastic] [protein_id=XP_016458993.1] [location=845..2191] [gbkey=CDS]
Sequence

ATGATTATAAACCTCTTCTCTCCTTCTTCTTGTTCTCTCTCCCTCTCACAATTAATTAAT
TCCAAATCACACATTTCTAAGTTCCATCTTAGGTCCAAAACTCATTTCTCAAAATCCTTA
TCATCTTCTTCAGAAAAACTCATTTTTCATTCCAAGAATCAATCTTTACATGACAAGAAT
ATATACCCACTTAGCAGAAGAAAAAAGCTTAAAACTTGGGCCATTCCTGGACTTGATTTT
GGTGGATTTGAGAGTGTACAGTCAGTATTTGAAGCAGTTAGTGTATTGACAGCTATTATT
GTAGTACATGAAAGTGGTCACTTTCTTGCTGCTTATCTTCAAGGTATTCATGTAAGTAAA
TTTGCTGTTGGGTTTGGTCCAATCTTAGCTAAATTCAATGCCAAAAATGTTGAGTATTCA
CTTAGAGCATTTCCTCTTGGTGGGTTTGTGGGGTTTCCTGATAATGATCCTGATAGTGAT
ATTCCCCCTGATGACAAAAATTTGCTTAAAAATAGACCTATATTTGATAGGGTGATTGTT
ATTTCAGCTGGTGTAATAGCTAATATAATCTTTGCTTATGTTATAATATTTACACAAGTG
TTGTTAGTTGGATTGCCTGTTCAAGAATCTTTCCCTGGAGTTCTTGTCCCTGATGTTAGG
CCTTTTTCAGCTGCATCTAGAGATGGATTACTTCCTGGCGATGTAATTTTAGGTTTAAAT
GGAATTGAATTAGGGAAAAGTGGACCTAATTTGGTTTCTGACGTTGTTGATGTTATCAAG
AAAAATCCCAAGAGAAATGTGTTGTTGAAAATAGGGAGAGGAGGAGGGAGTGTTGATATT
AGAGTTACCCCTGATGAGAATTCAGATGGTACGGGTAGGATTGGAGTTCAACTGTCACCA
AATTTTAAGATTTCGAAAGTTCAGCCTAAGAATATATTTGAGGCTTTTAGCTTCTCAGGA
AGAGAATTTTGGGGTCTTACGTATAATGTATTGGACAGTTTGAAACAGACTTTTATGAAC
TTCTCACAAACAGCTAGTAAGGTATCGGGTCCTGTTGCCATTATAGCTGTTGGTGCTGAA
GTTGCAAAATCAAACGTTGACGGCCTTTATCAATTTGCAGCTGTTTTGAATATCAACCTC
GCGGTTATAAATCTCCTTCCTTTGCCTGCGTTAGATGGGGGTTCTTTAGCCTTGATTCTT
GTAGAAGCAGCTAGAGGTGGAAAAAAGCTTCCTATAGAAGTAGAGCAACGGATTATGTCA
TCTGGAATCATGTTTGTGCTCATTATTGGACTATTCCTTCTAGTCCGTGATACTCTAAAC
CTTGATTTTATCAGGGATTTGTTATAA

Peptide Sequence

PEP ID

XP_016458993.1
PEP Infomation

PREDICTED: probable membrane metalloprotease ARASP2, chloroplastic [Nicotiana tabacum]
Sequence

MIINLFSPSSCSLSLSQLINSKSHISKFHLRSKTHFSKSLSSSSEKLIFHSKNQSLHDKN
IYPLSRRKKLKTWAIPGLDFGGFESVQSVFEAVSVLTAIIVVHESGHFLAAYLQGIHVSK
FAVGFGPILAKFNAKNVEYSLRAFPLGGFVGFPDNDPDSDIPPDDKNLLKNRPIFDRVIV
ISAGVIANIIFAYVIIFTQVLLVGLPVQESFPGVLVPDVRPFSAASRDGLLPGDVILGLN
GIELGKSGPNLVSDVVDVIKKNPKRNVLLKIGRGGGSVDIRVTPDENSDGTGRIGVQLSP
NFKISKVQPKNIFEAFSFSGREFWGLTYNVLDSLKQTFMNFSQTASKVSGPVAIIAVGAE
VAKSNVDGLYQFAAVLNINLAVINLLPLPALDGGSLALILVEAARGGKKLPIEVEQRIMS
SGIMFVLIIGLFLLVRDTLNLDFIRDLL

Transcript Sequence

Gene sequence data has not been registered.